scm_new_matrix: Constract a tgScMat
In tanaylab/metacell: Meta cell analysis for single cell RNA-seq data
scm_new_matrix R Documentation
Constract a tgScMat
Description
Constract a tgScMat gene expression matrix object
Usage
scm_new_matrix(mat, cell_metadata, stat_type = "umi")
Arguments
mat
A matrix containing the expression data (will be stored as a sparse matrix)
cell_metadata
dataframe with metadata on the cells. Rownames correspond to the cell names.
stat_type
Type of statistic. ("umi", "rpkm", "tpm" etc.). Default: "umi"
Value
A tgScMat gene expression matrix object
tanaylab/metacell documentation built on Oct. 19, 2023, 1:01 p.m.
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| scm_new_matrix | R Documentation |
Constract a tgScMat
Description
Constract a tgScMat gene expression matrix object
Usage
scm_new_matrix(mat, cell_metadata, stat_type = "umi")
Arguments
mat |
A matrix containing the expression data (will be stored as a sparse matrix) |
cell_metadata |
dataframe with metadata on the cells. Rownames correspond to the cell names. |
stat_type |
Type of statistic. ("umi", "rpkm", "tpm" etc.). Default: "umi" |
Value
A tgScMat gene expression matrix object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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