tgMCManifGraph-class: manifold graph structure over a metacell object

In tanaylab/metacell: Meta cell analysis for single cell RNA-seq data

manifold graph structure over a metacell object

Description

Splitting metacells over a discrete time axis, defining manifold connections and estimated flows over them

Slots

mc_id

id of the metacell object we represent as a network

times_nms

names of the time points (Default 1:T)

mc_t

distribution of metacells (rows) over time points (cols)

mc_manifold

a data frame defining triplets mc1, mc2, distance.

tanaylab/metacell documentation built on Jan. 29, 2025, 1:34 a.m.