addCharacteristics: get the characteristics of a bunch of GSM entries
In ttriche/sesamizeGEO: the poor man's methylation suite (cf. `sesamizer`)
View source: R/addCharacteristics.R
addCharacteristics R Documentation
get the characteristics of a bunch of GSM entries
Description
like it says on the tin. this is usually for filling out pData/colData
Usage
addCharacteristics(x, column = "subject", titles = TRUE, cachePath = NULL)
Arguments
x
an RGChannelSet or GenomicRatioSet with $subject, or GSMs
column
name of the column holding the GSMs ("subject")
titles
tack on the titles as well? (TRUE)
Details
this function rolls through the GSMs and grabs @header
Value
an rg/grSet, perhaps with more colData, or a data.frame
ttriche/sesamizeGEO documentation built on Nov. 12, 2023, 5:42 p.m.
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View source: R/addCharacteristics.R
| addCharacteristics | R Documentation |
get the characteristics of a bunch of GSM entries
Description
like it says on the tin. this is usually for filling out pData/colData
Usage
addCharacteristics(x, column = "subject", titles = TRUE, cachePath = NULL)
Arguments
x |
an RGChannelSet or GenomicRatioSet with $subject, or GSMs |
column |
name of the column holding the GSMs ("subject") |
titles |
tack on the titles as well? (TRUE) |
Details
this function rolls through the GSMs and grabs @header
Value
an rg/grSet, perhaps with more colData, or a data.frame
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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