getRGChannelSet: assemble a suitable RGChannelSet for sesamizing

In ttriche/sesamizeGEO: the poor man's methylation suite (cf. `sesamizer`)

assemble a suitable RGChannelSet for sesamizing

Description

Note: this should probably go away in favor of signalSet parallel processing

Usage

getRGChannelSet(subjects = NULL, frags = 1:3, samps = NULL, ...)

Arguments

subjects	the names of each subject, or NULL to autodetect (NULL)
frags	which elements to extract for the array Basename (1:3)
samps	targets data.frame (overrides subjects and frags) (NULL)
...	additional arguments to pass to read.metharray()

Value

       an RGChannelSet with pData $subject and $Basename filled 

ttriche/sesamizeGEO documentation built on Nov. 12, 2023, 5:42 p.m.