plotSNPcalls: call and plot SNPs from a matrix of SNP betas
In ttriche/sesamizeGEO: the poor man's methylation suite (cf. `sesamizer`)
plotSNPcalls R Documentation
call and plot SNPs from a matrix of SNP betas
Description
plot SNPs living in metadata(x)$SNPs, provided they match sampleNames(x)
Usage
plotSNPcalls(x, rotate = FALSE, ...)
Arguments
x
a grSet with SNPs in its metadata(), or a SNP matrix
rotate
rotate the subjects onto the side? (FALSE)
...
other arguments passed on to Heatmap
Details
The plotting itself is done by miser:::.plotSNPcallmat().
ttriche/sesamizeGEO documentation built on Nov. 12, 2023, 5:42 p.m.
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| plotSNPcalls | R Documentation |
call and plot SNPs from a matrix of SNP betas
Description
plot SNPs living in metadata(x)$SNPs, provided they match sampleNames(x)
Usage
plotSNPcalls(x, rotate = FALSE, ...)
Arguments
x |
a grSet with SNPs in its metadata(), or a SNP matrix |
rotate |
rotate the subjects onto the side? (FALSE) |
... |
other arguments passed on to Heatmap |
Details
The plotting itself is done by miser:::.plotSNPcallmat().
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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