plotFlaggedControls: simple function for plotting control probe failure flaggings
In ttriche/sesamizeGEO: the poor man's methylation suite (cf. `sesamizer`)
View source: R/plotFlaggedControls.R
plotFlaggedControls R Documentation
simple function for plotting control probe failure flaggings
Description
If an object is provided without suitable metadata, this function will fail.
See flag_control_failures().
Usage
plotFlaggedControls(x, only = FALSE, ...)
Arguments
x
an object w/!is.null(metadata(x)$control_flagged), or a matrix
only
only plot samples where there are failures? (FALSE)
...
additional parameters to pass to ComplexHeatmap::Heatmap
Value
a Heatmap
See Also
flag_control_failures
ttriche/sesamizeGEO documentation built on Nov. 12, 2023, 5:42 p.m.
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View source: R/plotFlaggedControls.R
| plotFlaggedControls | R Documentation |
simple function for plotting control probe failure flaggings
Description
If an object is provided without suitable metadata, this function will fail. See flag_control_failures().
Usage
plotFlaggedControls(x, only = FALSE, ...)
Arguments
x |
an object w/!is.null(metadata(x)$control_flagged), or a matrix |
only |
only plot samples where there are failures? (FALSE) |
... |
additional parameters to pass to ComplexHeatmap::Heatmap |
Value
a Heatmap
See Also
flag_control_failures
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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