CreateDesignMatrix: Convert perturbation dictionary to design matrix

In yanwu2014/perturbLM: A lightweight R package that uses linear models to analyze the effects of chemical/genetic perturbations, conditions, and disease states on single gene expression.

Convert perturbation dictionary to design matrix

Description

Convert perturbation dictionary to design matrix

Usage

CreateDesignMatrix(groups, min.cells = 10)

Arguments

groups	Perturbation dictionary (in list format) or named vector
min.cells	Min number of cells per perturbation

Value

Sparse binary matrix where rows are cells, and columns are perturbation. 1 means the cell received the perturbation.

yanwu2014/perturbLM documentation built on Aug. 24, 2023, 2:28 p.m.