Description Details See Also Examples
A ScreenDesign class object contains a special data frame specifying design of a screen, i.e. what goes into each well of a set of plates.
Initial implementation supports 96-well, 8*12 plates and mixtures of 2 compounds. Plate rows should be named A-H and columns 1-12. Design data frame must contain the following columns:
plate
plate identifier
column
column number, numeric, integer between 1 and 12
row
row, character or factor with values or levels A-H
experiment
experiment name, character or factor
cpd1
compound 1 name, character or factor
dose1
compound 1 dose, numeric
cpd2
compound 2 name, character or factor
dose2
compound 2 dose, numeric
Additional columns are allowed and will be ignored by SynergyScreen software. Correctness of the data frame structure is verified by a validity method and can be checked by calling validObject().
1 2 3 | data(sim15_screen3)
head(design(sim15_screen3),n=30)
str(design(sim15_screen3))
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