SynergyData-class: S4 class for a synergy data

In ybukhman/SynergyScreen: Analyze and simulate synergy screen data

Description

A SynergyData class object contains a special data frame containing interaction index values from a synergy screen

Details

SynergyData data frame must contain the following columns:

1. experiment the name of a synergy experiment, character or factor

2. model the name of the model used to fit dose-resoponse curves

3. effect effect value, numeric between 0 and 1

4. interaction.index interaction index value, a positive number

Additional columns are allowed and will be ignored by SynergyScreen software. Correctness of the data frame structure is verified by a validity method and can be checked by calling validObject().

See Also

data.frame, validObject, SynergyScreen

Examples

data(sim15_screen3)
head(synergy_data(sim15_screen3))
str(synergy_data(sim15_screen3))

ybukhman/SynergyScreen documentation built on May 4, 2019, 2:31 p.m.