plot-DRE-missing-method: Plot a DRE object

In ybukhman/SynergyScreen: Analyze and simulate synergy screen data

Description

Plot dose-response data and, if known, a fitted curve and/or a "true" curve on the basis of which the data have been simulated

Usage

## S4 method for signature 'DRE,missing'
plot(x, y, linearize = F, xlab = NULL,
  ylab = NULL, log = NULL, ...)

Arguments

x	object of class DRE
y	no parameter y is defined for this method
linearize	logical, defaults to FALSE (see Details)
xlab	a title for the x axis. If left unspecified, appropriate defaults are chosen for sigmoid and linearized plots.
ylab	a title for the y axis. If left unspecified, appropriate defaults are chosen for sigmoid and linearized plots.
log	a character string which contains "x" if the x axis is to be logarithmic, "y" if the y axis is to be logarithmic and "xy" or "yx" if both axes are to be logarithmic. If left unspecified, appropriate defaults are chosen for sigmoid and linearized plots.
...	additional arguments passed to the generic plot function

Details

If "linearize" is set to FALSE (default), plot response vs. dose. If TRUE, plot log(fraction.affected/fraction.unaffected) vs. log(dose), which is linear if the dose-response relationship follows the median effect law

See Also

DRE, plot

Examples

data(sim15_screen3)
plot(dre(sim15_screen3,"Cpd1"))

ybukhman/SynergyScreen documentation built on May 4, 2019, 2:31 p.m.