Files in ybukhman/SynergyScreen
Analyze and simulate synergy screen data

.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/Compound.R R/CompoundList.R R/DRE-accessors.R R/DRE.R R/DREList.R R/DRModel.R R/Functions.R R/Model.R R/ScreenData.R R/ScreenDesign.R R/SynergyData.R R/SynergyExperiment.R R/SynergyExperimentList.R R/SynergyScreen-accessors.R R/SynergyScreen.R R/checkRange.R R/computeSynergies.R R/datasetAnnotations.R R/designSummary.R R/dreData.R R/findSynergies.R R/fit.R R/generateDesign.R R/labelledData.R R/plotIsoboles.R R/predict.R R/simulate.R R/transferTrueValues.R R/writeWide.R
SynergyScreen.Rproj
data/sim15_screen3.RData
inst/extdata/15_cpds_simulation/15_cpds_save_data.R
inst/extdata/15_cpds_simulation/15_cpds_sim_results.RData
inst/extdata/15_cpds_simulation/15_cpds_simulation.R
inst/extdata/15_cpds_simulation/compounds_1.csv
inst/extdata/15_cpds_simulation/compounds_2.csv
inst/extdata/15_cpds_simulation/compounds_3.csv
inst/extdata/8_compounds/8_compounds.csv
inst/extdata/8_compounds/8_compounds_OD_data.csv
inst/extdata/8_compounds/8_compounds_design.csv
inst/extdata/8_compounds/8_compounds_design_actually_used.csv
inst/extdata/8_compounds/8_compounds_design_summary.csv
man/Compound-class.Rd man/CompoundList-class.Rd man/DRE-accessors.Rd man/DRE-class.Rd man/DREList-class.Rd man/DRModel-class.Rd man/DRModelLOESS-class.Rd man/DRModelMElm-class.Rd man/DRModelMEnls-class.Rd man/Model-class.Rd man/ScreenData-class.Rd man/ScreenDesign-class.Rd man/SynergyData-class.Rd man/SynergyExperiment-class.Rd man/SynergyExperimentList-class.Rd man/SynergyScreen-accessors.Rd man/SynergyScreen-class.Rd man/SynergyScreen-package.Rd man/boxplot-SynergyScreen-method.Rd man/character-class.Rd man/checkRange.Rd man/computeSynergies.Rd man/designFile2SynergyScreen.Rd man/designSummary.Rd man/dreData.Rd man/effectiveDose.Rd man/findSynergies.Rd man/fit.Rd man/generateDesign.Rd man/initialize-DRE-method.Rd man/initialize-SynergyExperiment-method.Rd man/interactionIndex.Rd man/labelledData.Rd man/lm-class.Rd man/loess-class.Rd man/meq.Rd man/nls-class.Rd man/normalize-SynergyScreen-method.Rd man/plot-DRE-missing-method.Rd man/plot-SynergyExperiment-missing-method.Rd man/plot-SynergyScreen-missing-method.Rd man/plotIsoboles.Rd man/plotMEQ.Rd man/predict-DRModelLOESS-method.Rd man/predict-DRModelMElm-method.Rd man/predict-DRModelMEnls-method.Rd man/readCompoundFile.Rd man/readTecanData.Rd man/readTecanFile.Rd man/readWideData.Rd man/readWideDataFlex.Rd man/sim15_screen3.Rd man/simulate.Rd man/transferTrueValues.Rd man/writeWide.Rd tests/testthat.R tests/testthat/test_compute_synergy.R tests/testthat/test_design.R tests/testthat/test_designSummary.R tests/testthat/test_simulate.R vignettes/Introduction-to-SynergyScreen.Rmd vignettes/SynergyScreen-quick-start.Rmd vignettes/simulation-of-15-compound-screen.Rmd
ybukhman/SynergyScreen documentation built on May 28, 2017, 8:38 a.m.