dreData: Retrive doses, normalized responses and effects

In ybukhman/SynergyScreen: Analyze and simulate synergy screen data

Description

Retrive doses, normalized responses and effects

Usage

dreData(object, ...)

## S4 method for signature 'DRE'
dreData(object)

## S4 method for signature 'SynergyScreen'
dreData(object, names = NULL)

Arguments

object	object of supported class, e.g. DRE or SynergyScreen
...	method-specific arguments: see below
names	the names of the dose-response experiments to retrieve data for, character

Details

DRE method

returns a data frame is generated from @dose, @response and @effect slots

SynergyScreen method

returns a data frame generated from @dose, @response and @effect slots of DRE objects contained in @dre_list slot of the SynergyScreen object. Use parameter names to retrieve data for specific dose-response experiments. If names=NULL, all dose-response data are retrieved

Value

data frame

Methods (by class)

• DRE: Retieve dose, normalized response and effect data from a DRE object

• SynergyScreen: Retieve dose, normalized response and effect data from DRE objects contained in the @dre_list slot of a SynergyScreen object

See Also

DRE, SynergyScreen

Examples

data(sim15_screen3)
dreData(sim15_screen3)
dreData(dre(sim15_screen3,"Cpd1"))

ybukhman/SynergyScreen documentation built on May 4, 2019, 2:31 p.m.