medianTotalIntensity: Whole-dataset-wide Median Total Intensity (M+U)
In zwdzwd/sesame: SEnsible Step-wise Analysis of DNA MEthylation BeadChips
medianTotalIntensity R Documentation
Whole-dataset-wide Median Total Intensity (M+U)
Description
The function takes one single SigDF and computes median
intensity of M+U for each probe. This function outputs a single
numeric for the median.
Usage
medianTotalIntensity(sdf, mask = TRUE)
Arguments
sdf
a SigDF
mask
whether to mask probes using mask column
Value
median of all intensities
Examples
sesameDataCache() # if not done yet
sdf <- sesameDataGet('EPIC.1.SigDF')
medianTotalIntensity(sdf)
zwdzwd/sesame documentation built on Dec. 21, 2024, 1:20 p.m.
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| medianTotalIntensity | R Documentation |
Whole-dataset-wide Median Total Intensity (M+U)
Description
The function takes one single SigDF and computes median
intensity of M+U for each probe. This function outputs a single
numeric for the median.
Usage
medianTotalIntensity(sdf, mask = TRUE)
Arguments
sdf |
a |
mask |
whether to mask probes using mask column |
Value
median of all intensities
Examples
sesameDataCache() # if not done yet
sdf <- sesameDataGet('EPIC.1.SigDF')
medianTotalIntensity(sdf)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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