testEnrichmentFisher: testEnrichmentFisher uses Fisher's exact test to estimate the...
In zwdzwd/sesame: SEnsible Step-wise Analysis of DNA MEthylation BeadChips
testEnrichmentFisher R Documentation
testEnrichmentFisher uses Fisher's exact test to estimate the association
between two categorical variables.
Description
Estimates log2 Odds ratio
Usage
testEnrichmentFisher(query, database, universe, alternative = "greater")
Arguments
query
Vector of probes of interest (e.g., significant probes)
database
Vectors corresponding to the database set of
interest with associated meta data as an attribute to each element.
universe
Vector of probes in the universe set containing all of
alternative
greater or two.sided (default: greater)
the probes to be considered in the test. (Default: NULL)
Value
A DataFrame with the estimate/statistic, p-value, and name of test
for the given results.
zwdzwd/sesame documentation built on April 28, 2024, 12:48 p.m.
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| testEnrichmentFisher | R Documentation |
testEnrichmentFisher uses Fisher's exact test to estimate the association between two categorical variables.
Description
Estimates log2 Odds ratio
Usage
testEnrichmentFisher(query, database, universe, alternative = "greater")
Arguments
query |
Vector of probes of interest (e.g., significant probes) |
database |
Vectors corresponding to the database set of interest with associated meta data as an attribute to each element. |
universe |
Vector of probes in the universe set containing all of |
alternative |
greater or two.sided (default: greater) the probes to be considered in the test. (Default: NULL) |
Value
A DataFrame with the estimate/statistic, p-value, and name of test for the given results.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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