totalIntensities: M+U Intensities Array
In zwdzwd/sesame: SEnsible Step-wise Analysis of DNA MEthylation BeadChips
totalIntensities R Documentation
M+U Intensities Array
Description
The function takes one single SigDF and computes total
intensity of all the in-band measurements by summing methylated and
unmethylated alleles. This function outputs a single numeric for the mean.
Usage
totalIntensities(sdf, mask = FALSE)
Arguments
sdf
a SigDF
mask
whether to mask probes using mask column
Value
a vector of M+U signal for each probe
Examples
sesameDataCache() # if not done yet
sdf <- sesameDataGet('EPIC.1.SigDF')
intensities <- totalIntensities(sdf)
zwdzwd/sesame documentation built on Nov. 11, 2024, 9:33 a.m.
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| totalIntensities | R Documentation |
M+U Intensities Array
Description
The function takes one single SigDF and computes total
intensity of all the in-band measurements by summing methylated and
unmethylated alleles. This function outputs a single numeric for the mean.
Usage
totalIntensities(sdf, mask = FALSE)
Arguments
sdf |
a |
mask |
whether to mask probes using mask column |
Value
a vector of M+U signal for each probe
Examples
sesameDataCache() # if not done yet
sdf <- sesameDataGet('EPIC.1.SigDF')
intensities <- totalIntensities(sdf)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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