Files in CEDARS

Simple and Efficient Pipeline for Electronic Health Record Annotation

README.md R/UMLS_processor.R R/database.R R/search.R R/negex_data.R R/accessory_functions.R R/data_io.R R/zzz.R R/text_processing.R R/dictionaries.R R/negex.R R/simulated_patients_data.R inst/shiny/app.R man/initialize_patients.Rd man/initialize_annotations.Rd man/populate_notes.Rd man/colorize.Rd man/select_patient.Rd man/initialize_notes.Rd man/mark.Rd man/lemma_match.Rd man/paste_sections.Rd man/populate_annotations.Rd man/add_end_user.Rd man/populate_dictionaries.Rd man/upload_notes.Rd man/negex_token_tagger.Rd man/format_keywords.Rd man/terminate_project_new.Rd man/db_upload.Rd man/mrrel_upload.Rd man/automatic_NLP_processor.Rd man/lock_records.Rd man/simulated_patients.Rd man/save_credentials.Rd man/save_query.Rd man/fast_merge_umls.Rd man/negex.Rd man/sentence_eval.Rd man/commit_patient.Rd man/password_verification.Rd man/unlock_user.Rd man/sanitize.Rd man/lock_records_admin.Rd man/get_patient.Rd man/batch_processor_db.Rd man/document_processor.Rd man/pre_search.Rd man/get_data.Rd man/patient_roster_update.Rd man/upload_events.Rd man/patient_processor_par.Rd man/standardize_nlp.Rd man/unlock_records.Rd man/complete_case.Rd man/find_model.Rd man/populate_query.Rd man/find_project_name.Rd man/terminate_project.Rd man/download_events.Rd man/negex_upload.Rd man/save_tags.Rd man/get_wrapper.Rd man/sanitize_query.Rd man/unlock_records_admin.Rd man/db_download.Rd man/token_splitter.Rd man/start_local.Rd man/end_users.Rd man/sentence_search.Rd man/negation_tagger.Rd man/post_wrapper.Rd man/negex_processor.Rd man/post_data.Rd man/initialize_users.Rd man/mrconso_upload.Rd man/mongo_connect.Rd man/dot-onLoad.Rd man/mongo_uri_standard.Rd man/aggregate_note.Rd man/create_project.Rd man/parse_query.Rd man/populate_users.Rd man/get_model.Rd man/umls_processor.Rd man/delete_end_user.Rd man/id_expander.Rd