scoreRankingGO | R Documentation |
scoreRankingGO provides ranking for a given list of GO-terms according to a score.
scoreRankingGO(goterm, domain = "BP", plot = TRUE)
goterm |
A list of GO-terms to be ordered |
domain |
The ontology of the GO-terms. The default is "BP" |
plot |
If FALSE the visualisation of the ordering is not provided. The default is TRUE. |
The function returns the ordered GO-terms, the indices corresponding to these GO-terms, the score of each GO-term and a plot of the visualization by default.
goterm <- c( "GO:0000278","GO:0006414","GO:0022403","GO:0006415", "GO:0045047","GO:0072599","GO:0006613","GO:0000184","GO:0070972", "GO:0006413","GO:0000087","GO:0000280","GO:0000279","GO:0006612", "GO:0000956","GO:0048285","GO:0019080","GO:0019083", "GO:0006402","GO:0032984","GO:0006401","GO:0072594","GO:0019058", "GO:0051301","GO:0016071","GO:0006412","GO:0002682","GO:0022411", "GO:0006614") #The GO-terms in the list are ordered according to a score scoreRankingGO(goterm = goterm, domain = "BP", plot = TRUE)
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