run.read.MDscan: Run and read MDscan on validation
In MEET: MEET: Motif Elements Estimation Toolkit
Description
Usage
Arguments
Details
Author(s)
See Also
Description
This function runs and reads MDscan on validation mode.
Usage
1
run.read.MDscan(input, k, len_motif, num_motif,call.MDscan)
Arguments
input
DNA sequence
k
Length DNA candidate seqeunce
len_motif
Length motif
num_motif
Number motif
call.MDscan
Path MDscan
Details
This function needs seqinr-Package and MDscan software.
Author(s)
Erola Pairo <epeiroatibec.pcb.ub.es> and Joan Maynou <joan.maynouatupc.edu>
See Also
MEET, kfold.PredictInformationTheory, MEME, kfold.PredictDivergence, kfold.PCA
MEET documentation built on May 2, 2019, 1:45 p.m.
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Description Usage Arguments Details Author(s) See Also
Description
This function runs and reads MDscan on validation mode.
Usage
1 | run.read.MDscan(input, k, len_motif, num_motif,call.MDscan)
|
Arguments
input |
DNA sequence |
k |
Length DNA candidate seqeunce |
len_motif |
Length motif |
num_motif |
Number motif |
call.MDscan |
Path MDscan |
Details
This function needs seqinr-Package and MDscan software.
Author(s)
Erola Pairo <epeiroatibec.pcb.ub.es> and Joan Maynou <joan.maynouatupc.edu>
See Also
MEET, kfold.PredictInformationTheory, MEME, kfold.PredictDivergence, kfold.PCA
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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