API for enveomics.R
Various Utilities for Microbial Genomics and Metagenomics
| Global functions | |
|---|---|
| $,enve.GrowthCurve-method | Man page |
| $,enve.RecPlot2-method | Man page |
| $,enve.RecPlot2.Peak-method | Man page |
| enve.GrowthCurve | Man page |
| enve.GrowthCurve-class | Man page |
| enve.RecPlot2 | Man page |
| enve.RecPlot2-class | Man page |
| enve.RecPlot2.Peak | Man page |
| enve.RecPlot2.Peak-class | Man page |
| enve.TRIBS | Man page |
| enve.TRIBS-class | Man page |
| enve.TRIBS.merge | Man page Source code |
| enve.TRIBStest | Man page |
| enve.TRIBStest-class | Man page |
| enve.__prune.iter | Man page Source code |
| enve.__prune.reduce | Man page Source code |
| enve.__tribs | Man page Source code |
| enve.barplot | Man page Source code |
| enve.cliopts | Man page Source code |
| enve.col.alpha | Man page Source code |
| enve.col2alpha | Man page Source code |
| enve.df2dist | Man page Source code |
| enve.df2dist.group | Man page Source code |
| enve.df2dist.list | Man page Source code |
| enve.growthcurve | Man page Source code |
| enve.prefscore | Man page |
| enve.prune.dist | Man page Source code |
| enve.recplot | Man page Source code |
| enve.recplot2 | Man page Source code |
| enve.recplot2.ANIr | Man page |
| enve.recplot2.__counts | Man page Source code |
| enve.recplot2.__peakHist | Man page Source code |
| enve.recplot2.__whichClosestPeak | Man page Source code |
| enve.recplot2.changeCutoff | Man page Source code |
| enve.recplot2.compareIdentities | Man page |
| enve.recplot2.coordinates | Man page Source code |
| enve.recplot2.corePeak | Man page Source code |
| enve.recplot2.extractWindows | Man page Source code |
| enve.recplot2.findPeaks | Man page Source code |
| enve.recplot2.findPeaks.__em_e | Man page Source code |
| enve.recplot2.findPeaks.__em_m | Man page Source code |
| enve.recplot2.findPeaks.__emauto_one | Man page Source code |
| enve.recplot2.findPeaks.__mow_one | Man page Source code |
| enve.recplot2.findPeaks.__mower | Man page Source code |
| enve.recplot2.findPeaks.em | Man page Source code |
| enve.recplot2.findPeaks.emauto | Man page Source code |
| enve.recplot2.findPeaks.mower | Man page Source code |
| enve.recplot2.seqdepth | Man page Source code |
| enve.recplot2.windowDepthThreshold | Man page Source code |
| enve.selvector | Man page Source code |
| enve.tribs | Man page Source code |
| enve.tribs.test | Man page Source code |
| enve.truncate | Man page Source code |
| growth.curves | Man page |
| phyla.counts | Man page |
| plot.enve.GrowthCurve | Man page Source code |
| plot.enve.RecPlot2 | Man page |
| plot.enve.TRIBS | Man page Source code |
| plot.enve.TRIBStest | Man page Source code |
| summary.enve.GrowthCurve | Man page Source code |
| summary.enve.TRIBS | Man page Source code |
| summary.enve.TRIBStest | Man page Source code |
