Man pages for ergm
Fit, Simulate and Diagnose Exponential-Family Models for Networks
| absdiffcat-ergmTerm | Categorical absolute difference in nodal attribute |
| absdiff-ergmTerm | Absolute difference in nodal attribute |
| altkstar-ergmTerm | Alternating k-star |
| anova.ergm | ANOVA for ERGM Fits |
| approx.hotelling.diff.test | Approximate Hotelling T^2-Test for One or Two Population... |
| as.network.numeric | Create a Simple Random network of a Given Size |
| as.rlebdm.ergm | Extract dyad-level ERGM constraint information from an 'ergm'... |
| as.rlebdm.ergm_conlist | Extract dyad-level ERGM constraint information into an... |
| asymmetric-ergmTerm | Asymmetric dyads |
| atleast-ergmTerm | Number of dyads with values greater than or equal to a... |
| atmost-ergmTerm | Number of dyads with values less than or equal to a threshold |
| attrcov-ergmTerm | Edge covariate by attribute pairing |
| b1concurrent-ergmTerm | Concurrent node count for the first mode in a bipartite... |
| b1cov-ergmTerm | Main effect of a covariate for the first mode in a bipartite... |
| b1degrange-ergmTerm | Degree range for the first mode in a bipartite network |
| b1degree-ergmTerm | Degree for the first mode in a bipartite network |
| b1degrees-ergmConstraint | Preserve the actor degree for bipartite networks |
| b1dsp-ergmTerm | Dyadwise shared partners for dyads in the first bipartition |
| b1factor-ergmTerm | Factor attribute effect for the first mode in a bipartite... |
| b1mindegree-ergmTerm | Minimum degree for the first mode in a bipartite network |
| b1nodematch-ergmTerm | Nodal attribute-based homophily effect for the first mode in... |
| b1sociality-ergmTerm | Degree |
| b1star-ergmTerm | k-Stars for the first mode in a bipartite network |
| b1starmix-ergmTerm | Mixing matrix for k-stars centered on the first mode of a... |
| b1twostar-ergmTerm | Two-star census for central nodes centered on the first mode... |
| b2concurrent-ergmTerm | Concurrent node count for the second mode in a bipartite... |
| b2cov-ergmTerm | Main effect of a covariate for the second mode in a bipartite... |
| b2degrange-ergmTerm | Degree range for the second mode in a bipartite network |
| b2degree-ergmTerm | Degree for the second mode in a bipartite network |
| b2degrees-ergmConstraint | Preserve the receiver degree for bipartite networks |
| b2dsp-ergmTerm | Dyadwise shared partners for dyads in the second bipartition |
| b2factor-ergmTerm | Factor attribute effect for the second mode in a bipartite... |
| b2mindegree-ergmTerm | Minimum degree for the second mode in a bipartite network |
| b2nodematch-ergmTerm | Nodal attribute-based homophily effect for the second mode in... |
| b2sociality-ergmTerm | Degree |
| b2star-ergmTerm | k-Stars for the second mode in a bipartite network |
| b2starmix-ergmTerm | Mixing matrix for k-stars centered on the second mode of a... |
| b2twostar-ergmTerm | Two-star census for central nodes centered on the second mode... |
| balance-ergmTerm | Balanced triads |
| bd-ergmConstraint | Constrain maximum and minimum vertex degree |
| BDStratTNT-ergmProposal | TNT proposal with degree bounds |
| B-ergmTerm | Wrap binary terms for use in valued models |
| Bernoulli-ergmReference | Bernoulli reference |
| blockdiag-ergmConstraint | Force a block-diagonal structure on the network |
| blocks-ergmConstraint | Constrain "blocks" of dyads |
| call.ErgmTerm | Locate and call an ERGM term initialization function. |
| check.ErgmTerm | Ensures an Ergm Term and its Arguments Meet Appropriate... |
| cohab | Target statistics and model fit to a hypothetical 50,000-node... |
| coincidence-ergmTerm | Coincident node count for the second mode in a bipartite (aka... |
| concurrent-ergmTerm | Concurrent node count |
| concurrentties-ergmTerm | Concurrent tie count |
| CondB1Degree-ergmProposal | MHp for b1degree constraints |
| CondB2Degree-ergmProposal | MHp for b2degree constraints |
| CondDegreeDist-ergmProposal | MHp for degreedist constraints |
| CondDegree-ergmProposal | MHp for degree constraints |
| CondDegreeMix-ergmProposal | MHp for degree mix constraints |
| CondInDegreeDist-ergmProposal | MHp for idegreedist constraints |
| CondInDegree-ergmProposal | MHp for idegree constraints |
| CondOutDegreeDist-ergmProposal | MHp for odegreedist constraints |
| CondOutDegree-ergmProposal | MHp for odegree constraints |
| ConstantEdges-ergmProposal | MHp for edges constraints |
| control.ergm | Auxiliary for Controlling ERGM Fitting |
| control.ergm.bridge | Auxiliaries for Controlling 'ergm.bridge.llr()' and... |
| control.ergm.godfather | Control parameters for 'ergm.godfather()'. |
| control.gof | Auxiliary for Controlling ERGM Goodness-of-Fit Evaluation |
| control.san | Auxiliary for Controlling SAN |
| control.simulate.ergm | Auxiliary for Controlling ERGM Simulation |
| ctriple-ergmTerm | Cyclic triples |
| Curve-ergmTerm | Impose a curved structure on term parameters |
| cycle-ergmTerm | k-Cycle Census |
| cyclicalties-ergmTerm | Cyclical ties |
| cyclicalweights-ergmTerm | Cyclical weights |
| ddsp-ergmTerm | Directed dyadwise shared partners |
| degcor-ergmTerm | Degree Correlation |
| degcrossprod-ergmTerm | Degree Cross-Product |
| degrange-ergmTerm | Degree range |
| degree1.5-ergmTerm | Degree to the 3/2 power |
| degreedist | Computes and Returns the Degree Distribution Information for... |
| degreedist-ergmConstraint | Preserve the degree distribution of the given network |
| degree-ergmTerm | Degree |
| degrees-ergmConstraint | Preserve the degree of each vertex of the given network |
| density-ergmTerm | Density |
| desp-ergmTerm | Directed edgewise shared partners |
| dgwdsp-ergmTerm | Geometrically weighted dyadwise shared partner distribution |
| dgwesp-ergmTerm | Geometrically weighted edgewise shared partner distribution |
| dgwnsp-ergmTerm | Geometrically weighted non-edgewise shared partner... |
| diff-ergmTerm | Difference |
| DiscUnif2-ergmProposal | TODO |
| DiscUnif-ergmProposal | TODO |
| DiscUnif-ergmReference | Discrete Uniform reference |
| DiscUnifNonObserved-ergmProposal | TODO |
| DistRLE-ergmProposal | TODO |
| dnsp-ergmTerm | Directed non-edgewise shared partners |
| dot-dyads-ergmConstraint | A meta-constraint indicating handling of arbitrary dyadic... |
| dsp-ergmTerm | Dyadwise shared partners |
| dyadcov-ergmTerm | Dyadic covariate |
| dyadnoise-ergmConstraint | A soft constraint to adjust the sampled distribution for... |
| dyadnoise-ergmProposal | TODO |
| dyadnoiseTNT-ergmProposal | TODO |
| Dyads-ergmConstraint | Constrain fixed or varying dyad-independent terms |
| ecoli | Two versions of an E. Coli network dataset |
| edgecov-ergmTerm | Edge covariate |
| edges-ergmConstraint | Preserve the edge count of the given network |
| edges-ergmTerm | Number of edges in the network |
| egocentric-ergmConstraint | Preserve values of dyads incident on vertices with given... |
| enformulate.curved-deprecated | Convert a curved ERGM into a form suitable as initial values... |
| equalto-ergmTerm | Number of dyads with values equal to a specific value (within... |
| ergm | Exponential-Family Random Graph Models |
| ergm.allstats | Calculate all possible vectors of statistics on a network for... |
| ergm_bd_init | Initializes the parameters to bound degree during sampling |
| ergm.bridge.llr | Bridge sampling to evaluate ERGM log-likelihoods and... |
| ergmConstraint | Sample Space Constraints for Exponential-Family Random Graph... |
| ergm_Cstate_clear | Deallocate the C data structures corresponding to an... |
| ergm-defunct | Functions that have been removed from this package |
| ergm-deprecated | Functions that will no longer be supported in future releases... |
| ergm.design | Obtain the set of informative dyads based on the network... |
| ergm_dyadgen_select | A helper function to select and construct a dyad generator... |
| ergm_edgecov_args | A common pattern for obtaining an edge covariate |
| ergm-errors | Sensible error and warning messages by 'ergm' initializers |
| ergm.estfun | Compute the Sample Estimating Function Values of an ERGM. |
| ergm.eta | Operations to map curved 'ergm()' parameters onto canonical... |
| ergm.exact | Calculate the exact loglikelihood for an ERGM |
| ergm.geodistdist | Calculate geodesic distance distribution for a network or... |
| ergm.getnetwork | Acquire and verify the network from the LHS of an 'ergm'... |
| ergm.godfather | A function to apply a given series of changes to a network. |
| ergm_GWDECAY | Curved settings for geometric weights for the gw* terms |
| ergmHint | MCMC Hints for Exponential-Family Random Graph Models |
| ergm-internal | Internal ergm Objects |
| ergm_keyword | Dynamic ERGM keyword registry |
| ergmKeyword | Keywords defined for Exponential-Family Random Graph Models |
| ergmlhs | An API for specifying aspects of an 'ergm' model in the... |
| ergm_MCMC_sample | Internal Function to Sample Networks and Network Statistics |
| ergm_mk_std_op_namewrap | Combine an operator term's and a subterm's name in a standard... |
| ergm_model | Internal representation of an 'ergm' network model |
| ergm.mple | Find a maximizer to the psuedolikelihood function |
| ergmMPLE | ERGM Predictors and response for logistic regression... |
| ergm-options | Global options and term options for the 'ergm' package |
| ergm-package | Fit, Simulate and Diagnose Exponential-Family Models for... |
| ergm-parallel | Parallel Processing in the 'ergm' Package |
| ergm_plot.mcmc.list | Plot MCMC list using 'lattice' package graphics |
| ergm_preprocess_response | Update the network and the response argument. |
| ergm_propagate_ext.encode | Extended states for submodels |
| ergm_proposal | Functions to initialize the ergm_proposal object |
| ergmProposal | Metropolis-Hastings Proposal Methods for ERGM MCMC |
| ergm_proposal_table | Table mapping reference,constraints, etc. to ERGM... |
| ergmReference | Reference Measures for Exponential-Family Random Graph Models |
| ergm_SAN_slave | Internal Function to Perform Simulated Annealing |
| ergm_state | A Representation of ERGM state |
| ergm_state_cache | A rudimentary cache for large objects |
| ergm_symmetrize | Return a symmetrized version of a binary network |
| ergmTerm | Terms used in Exponential Family Random Graph Models |
| esp-ergmTerm | Edgewise shared partners |
| Exp-ergmTerm | Exponentiate a network's statistic |
| faux.desert.high | Faux desert High School as a network object |
| faux.dixon.high | Faux dixon High School as a network object |
| faux.magnolia.high | Goodreau's Faux Magnolia High School as a network object |
| faux.mesa.high | Goodreau's Faux Mesa High School as a network object |
| F-ergmTerm | Filtering on arbitrary one-term model |
| fixallbut-ergmConstraint | Preserve the dyad status in all but the given edges |
| fix.curved | Convert a curved ERGM into a corresponding "fixed" ERGM. |
| fixedas-ergmConstraint | Preserve and preclude edges |
| florentine | Florentine Family Marriage and Business Ties Data as a... |
| g4 | Goodreau's four node network as a "network" object |
| get.node.attr | Retrieve and check assumptions about vertex attributes (nodal... |
| geweke.diag.mv | Multivariate version of 'coda"s 'coda::geweke.diag()'. |
| gof | Conduct Goodness-of-Fit Diagnostics on a Exponential Family... |
| greaterthan-ergmTerm | Number of dyads with values strictly greater than a threshold |
| gwb1degree-ergmTerm | Geometrically weighted degree distribution for the first mode... |
| gwb1dsp-ergmTerm | Geometrically weighted dyadwise shared partner distribution... |
| gwb2degree-ergmTerm | Geometrically weighted degree distribution for the second... |
| gwb2dsp-ergmTerm | Geometrically weighted dyadwise shared partner distribution... |
| gwdegree-ergmTerm | Geometrically weighted degree distribution |
| gwdsp-ergmTerm | Geometrically weighted dyadwise shared partner distribution |
| gwesp-ergmTerm | Geometrically weighted edgewise shared partner distribution |
| gwidegree-ergmTerm | Geometrically weighted in-degree distribution |
| gwnsp-ergmTerm | Geometrically weighted nonedgewise shared partner... |
| gwodegree-ergmTerm | Geometrically weighted out-degree distribution |
| HammingConstantEdges-ergmProposal | TODO |
| hamming-ergmConstraint | Preserve the hamming distance to the given network (BROKEN:... |
| hamming-ergmTerm | Hamming distance |
| HammingTNT-ergmProposal | TODO |
| idegrange-ergmTerm | In-degree range |
| idegree1.5-ergmTerm | In-degree to the 3/2 power |
| idegreedist-ergmConstraint | Preserve the indegree distribution |
| idegree-ergmTerm | In-degree |
| idegrees-ergmConstraint | Preserve indegree for directed networks |
| ininterval-ergmTerm | Number of dyads whose values are in an interval |
| intransitive-ergmTerm | Intransitive triads |
| is.curved | Testing for curved exponential family |
| is.dyad.independent | Testing for dyad-independence |
| is.inCH | Determine whether a vector is in the closure of the convex... |
| isolatededges-ergmTerm | Isolated edges |
| isolates-ergmTerm | Isolates |
| istar-ergmTerm | In-stars |
| is.valued | Function to check whether an ERGM fit or some aspect of it is... |
| kapferer | Kapferer's tailor shop data |
| kstar-ergmTerm | k-Stars |
| Label-ergmTerm | Modify terms' coefficient names |
| localtriangle-ergmTerm | Triangles within neighborhoods |
| Log-ergmTerm | Take a natural logarithm of a network's statistic |
| logLik.ergm | A 'logLik' method for 'ergm' fits. |
| logLikNull | Calculate the null model likelihood |
| m2star-ergmTerm | Mixed 2-stars, a.k.a 2-paths |
| mcmc.diagnostics | Conduct MCMC diagnostics on a model fit |
| meandeg-ergmTerm | Mean vertex degree |
| mm-ergmTerm | Mixing matrix cells and margins |
| molecule | Synthetic network with 20 nodes and 28 edges |
| mutual-ergmTerm | Mutuality |
| nearsimmelian-ergmTerm | Near simmelian triads |
| network.list | A convenience container for a list of 'network' objects,... |
| nodal_attributes | Specifying nodal attributes and their levels |
| nodal_attributes-API | Helper functions for specifying nodal attribute levels |
| nodecovar-ergmTerm | Covariance of undirected dyad values incident on each actor |
| nodecov-ergmTerm | Main effect of a covariate |
| nodefactor-ergmTerm | Factor attribute effect |
| nodeicovar-ergmTerm | Covariance of in-dyad values incident on each actor |
| nodeicov-ergmTerm | Main effect of a covariate for in-edges |
| nodeifactor-ergmTerm | Factor attribute effect for in-edges |
| nodematch-ergmTerm | Uniform homophily and differential homophily |
| NodematchFilter-ergmTerm | Filtering on nodematch |
| nodemix-ergmTerm | Nodal attribute mixing |
| nodeocovar-ergmTerm | Covariance of out-dyad values incident on each actor |
| nodeocov-ergmTerm | Main effect of a covariate for out-edges |
| nodeofactor-ergmTerm | Factor attribute effect for out-edges |
| nparam | Length of the parameter vector associated with an object or... |
| nsp-ergmTerm | Nonedgewise shared partners |
| nvattr.copy.network | Copy network- and vertex-level attributes between two network... |
| observed-ergmConstraint | Preserve the observed dyads of the given network |
| odegrange-ergmTerm | Out-degree range |
| odegree1.5-ergmTerm | Out-degree to the 3/2 power |
| odegreedist-ergmConstraint | Preserve the outdegree distribution |
| odegree-ergmTerm | Out-degree |
| odegrees-ergmConstraint | Preserve outdegree for directed networks |
| Offset-ergmTerm | Terms with fixed coefficients |
| opentriad-ergmTerm | Open triads |
| ostar-ergmTerm | k-Outstars |
| param_names | Names of the parameters associated with an object. |
| predict.formula | ERGM-based tie probabilities |
| Prod-ergmTerm | A product (or an arbitrary power combination) of one or more... |
| randomtoggle-ergmProposal | Propose a randomly selected dyad to toggle |
| rank_test.ergm | A lack-of-fit test for ERGMs |
| receiver-ergmTerm | Receiver effect |
| rlebdm | RLE-Compressed Boolean Dyad Matrix |
| samplk | Longitudinal networks of positive affection within a... |
| sampson | Cumulative network of positive affection within a monastery... |
| san | Use Simulated Annealing to attempt to match a network to a... |
| search.ergmConstraints | Search the ERGM Constraint |
| search.ergmProposals | Search the ERGM Proposals |
| search.ergmReferences | Search the ERGM References |
| search.ergmTerms | Search the ERGM terms |
| sender-ergmTerm | Sender effect |
| S-ergmTerm | Evaluation on an induced subgraph |
| simmelian-ergmTerm | Simmelian triads |
| simmelianties-ergmTerm | Ties in simmelian triads |
| simulate.ergm | Draw from the distribution of an Exponential Family Random... |
| simulate.formula | A 'simulate' Method for 'formula' objects that dispatches... |
| smalldiff-ergmTerm | Number of ties between actors with similar attribute values |
| smallerthan-ergmTerm | Number of dyads with values strictly smaller than a threshold |
| snctrl | Statnet Control |
| sociality-ergmTerm | Undirected degree |
| sparse-ergmHint | Sparse network |
| spectrum0.mvar | Multivariate version of 'coda"s 'spectrum0.ar()'. |
| StdNormal-ergmProposal | TODO |
| StdNormal-ergmReference | Standard Normal reference |
| strat-ergmHint | Stratified dyads |
| sum-ergmTerm | Sum of dyad values (optionally taken to a power) |
| summary.ergm | Summarizing ERGM Model Fits |
| summary.ergm_model | Evaluate network summary statistics from an initialized ergm... |
| summary_formula | Dispatching a summary function based on the class of the LHS... |
| summary.formula | Calculation of network or graph statistics or other... |
| Sum-operator-ergmTerm | A sum (or an arbitrary linear combination) of one or more... |
| Symmetrize-ergmTerm | Evaluation on symmetrized (undirected) network |
| threetrail-ergmTerm | Three-trails |
| TNT-ergmProposal | Default MH algorithm |
| to_ergm_Cdouble | Methods to serialize objects into numeric vectors for passing... |
| transitive-ergmTerm | Transitive triads |
| transitiveties-ergmTerm | Transitive ties |
| transitiveweights-ergmTerm | Transitive weights |
| triadcensus-ergmTerm | Triad census |
| triangle-ergmTerm | Triangles |
| tripercent-ergmTerm | Triangle percentage |
| ttriple-ergmTerm | Transitive triples |
| twopath-ergmTerm | 2-Paths |
| Unif-ergmProposal | TODO |
| Unif-ergmReference | Continuous Uniform reference |
| UnifNonObserved-ergmProposal | TODO |
| update.network | Update the edges in a network based on a matrix |
| wrap.ergm_model | Wrap a submodel's curved, empty network statistics, and... |
| wtd.median | Weighted Median |
