tiff.list: Used by analysis functions to read in 8-layer and 10-layer...
In AstroPathJHU/mIFTO: mIFTO: Multiplex Immunoflourescence Titration Optimization
tiff.list R Documentation
Used by analysis functions to read in 8-layer and 10-layer
component_tiff images
Description
tiff.list;
Created By: Benjamin Green;
Last Edited 11/12/2018
Usage
tiff.list(wd, pattern.in)
Arguments
wd
is the working directory
pattern.in
is the pattern used by R to determine which image or images to read in
Details
This script is designed to read in the
component_tiff image or images exported from inForm (R) CellAnaylsis
The function returns a data.frame of n columns, each column in the
data.frame designates a different layer of the image designated
here as DAPI; Flours; AF; however the column/names order may change
depending on the library used to export images from inForm(R)
Value
tiff.list is an 8 column data.frame where each column holds the pixel intensities for a single image layer
AstroPathJHU/mIFTO documentation built on April 14, 2025, 7:22 a.m.
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| tiff.list | R Documentation |
Used by analysis functions to read in 8-layer and 10-layer component_tiff images
Description
tiff.list; Created By: Benjamin Green; Last Edited 11/12/2018
Usage
tiff.list(wd, pattern.in)
Arguments
wd |
is the working directory |
pattern.in |
is the pattern used by R to determine which image or images to read in |
Details
This script is designed to read in the component_tiff image or images exported from inForm (R) CellAnaylsis The function returns a data.frame of n columns, each column in the data.frame designates a different layer of the image designated here as DAPI; Flours; AF; however the column/names order may change depending on the library used to export images from inForm(R)
Value
tiff.list is an 8 column data.frame where each column holds the pixel intensities for a single image layer
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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