View source: R/cyto_channels-helpers.R
cyto_channels | R Documentation |
Simply a wrapper around colnames
to extract the channels associated
with a flowFrame
, flowSet
or GatingSet
.
cyto_channels(x, select = NULL, exclude = NULL, ...)
x |
object of class |
select |
vector of channel names to select. |
exclude |
vector of channel names to exclude. |
... |
additional arguments passed to |
vector of channel names.
Dillon Hammill, Dillon.Hammill@anu.edu.au
cyto_fluor_channels
# Load in CytoExploreRData to access data
library(CytoExploreRData)
# Activation flowSet
fs <- Activation
# Activation GatingSet
gs <- GatingSet(fs)
# flowFrame
cyto_channels(fs[[1]])
# flowSet
cyto_channels(fs)
# GatingHierarchy
cyto_channels(gs[[1]])
# GatingSet - exclude FSC & SSC channels
cyto_channels(gs, exclude = c("FSC","SSC"))
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