cyto_names: Extract sample names

In DillonHammill/CytoExploreR: Interactive Analysis of Cytometry Data

Description

Simply a convenient and autocomplete-friendly wrapper around identifier sampleNames to extract the sample names from flowFrame, flowSet GatingHierarchy or GatingSet. Anonymous flowFrame identifiers will be converted to "Combined Events".

Usage

cyto_names(x)

## S3 method for class 'flowFrame'
cyto_names(x)

## S3 method for class 'flowSet'
cyto_names(x)

## S3 method for class 'GatingHierarchy'
cyto_names(x)

## S3 method for class 'GatingSet'
cyto_names(x)

## S3 method for class 'list'
cyto_names(x)

Arguments

x	object of class flowFrame, flowSet, GatingSet or GatingSet.

Value

names associated with the supplied object.

Author(s)

Dillon Hammill, [e-mail]

Examples

# Load in CytoExploreRData to access data
library(CytoExploreRData)

# Activation flowSet
fs <- Activation

# Activation GatingSet
gs <- GatingSet(fs)

# flowFrame
cyto_names(fs[[1]])

# flowSet
cyto_names(fs)

# GatingHierarchy
cyto_names(gs[[1]])

# GatingSet
cyto_names(gs)

DillonHammill/CytoExploreR documentation built on July 9, 2020, 1:53 a.m.