cyto_markers_edit: Assign marker names to flowFrame or flowSet

Description Usage Arguments Value Author(s) Examples

View source: R/cyto-helpers.R

Description

cyto_markers_edit opens an editable table containing a list of channels and markers for a flowFrame, flowSet, GatingSet or GatingSet. Users can edit the name or desc columns with updated channel names or marker names respectively. These entries will be updated in the x upon closing the window and saved to a "Experiment-markers.csv" file for future use.

Usage

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Arguments

x

object of class flowFrame, flowSet, GatingSet or GatingSet.

file

name of csv file containing columns 'channel' and 'marker'.

...

additional arguments passed to data_editor.

Value

save inputs to "Experiment-Markers.csv" and returns updated samples.

Author(s)

Dillon Hammill, Dillon.Hammill@anu.edu.au

Examples

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## Not run: 
# Load in CytoExploreRData to access data
library(CytoExploreRData)

# Load in samples
fs <- Activation

# Add marker names to channels - edit table
fs <- cyto_markers_edit(fs)

## End(Not run)

DillonHammill/CytoExploreR documentation built on July 9, 2020, 1:53 a.m.