View source: R/cyto_channels-helpers.R
cyto_markers | R Documentation |
Extract marker names
## S3 method for class 'GatingSet'
cyto_markers(x, select = NULL, exclude = NULL, ...)
## S3 method for class 'GatingHierarchy'
cyto_markers(x, select = NULL, exclude = NULL, ...)
## S3 method for class 'flowSet'
cyto_markers(x, select = NULL, exclude = NULL, ...)
## S3 method for class 'flowFrame'
cyto_markers(x, select = NULL, exclude = NULL, ...)
x |
object of class |
select |
vector of channels or markers for which the channel/marker combinations should be returned. |
exclude |
vector of channels or markers for which the channel/marker combinations should not be returned. |
... |
additional arguments passed to |
vector of marker names or NULL if no markers have been assigned.
Dillon Hammill, Dillon.Hammill@anu.edu.au
cyto_channels
cyto_fluor_channels
# Load in CytoExploreRData to access data
library(CytoExploreRData)
# Activation flowSet
fs <- Activation
# Activation GatingSet
gs <- GatingSet(fs)
# flowFrame
cyto_markers(fs[[1]])
# flowSet
cyto_markers(fs)
# GatingHierarchy
cyto_markers(gs[[1]])
# GatingSet
cyto_markers(gs)
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