samtoolsSort: Calls the samtools 'sort' command
In HenrikBengtsson/aroma.seq: High-Throughput Sequence Analysis using the Aroma Framework
Description
Usage
Arguments
Author(s)
Description
Calls the samtools 'sort' command.
Usage
1
2
## Default S3 method:
samtoolsSort(pathname, pathnameD, ..., verbose=FALSE)
Arguments
pathname
A SAM/BAM file.
pathnameD
The destination pathname.
...
Additional arguments specifying samtools 'sort' switches
passed to systemSamtools().
verbose
See Verbose.
Author(s)
Henrik Bengtsson
HenrikBengtsson/aroma.seq documentation built on Feb. 15, 2021, 2:21 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Author(s)
Description
Calls the samtools 'sort' command.
Usage
1 2 | ## Default S3 method:
samtoolsSort(pathname, pathnameD, ..., verbose=FALSE)
|
Arguments
pathname |
A SAM/BAM file. |
pathnameD |
The destination pathname. |
... |
Additional arguments specifying samtools 'sort' switches
passed to |
verbose |
See |
Author(s)
Henrik Bengtsson
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.