systemTopHatBuild: Calls the TopHat executable, specifically to build a...
In HenrikBengtsson/aroma.seq: High-Throughput Sequence Analysis using the Aroma Framework
Description
Usage
Arguments
Author(s)
Description
Calls the TopHat executable, specifically to build a transcriptome index.
Usage
1
2
## Default S3 method:
systemTopHatBuild(..., system2Args, .fake=FALSE, verbose=FALSE)
Arguments
...
Arguments specifying TopHat command line switches.
.fake
If TRUE, the executable is not called.
system2Args
Arguments to be passed to system2
verbose
See Verbose.
Author(s)
Taku Tokuyasu
HenrikBengtsson/aroma.seq documentation built on Feb. 15, 2021, 2:21 a.m.
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Description Usage Arguments Author(s)
Description
Calls the TopHat executable, specifically to build a transcriptome index.
Usage
1 2 | ## Default S3 method:
systemTopHatBuild(..., system2Args, .fake=FALSE, verbose=FALSE)
|
Arguments
... |
Arguments specifying TopHat command line switches. |
.fake |
If |
system2Args |
Arguments to be passed to system2 |
verbose |
See |
Author(s)
Taku Tokuyasu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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