View source: R/surveyDatasets.R
surveyDatasets | R Documentation |
Metadata survey for all available datasets in the scRNAseq package.
surveyDatasets(cache = cacheDirectory(), overwrite = FALSE, latest = TRUE)
cache , overwrite |
Arguments to pass to |
latest |
Whether to only consider the latest version of each dataset. |
The returned DataFrame contains the usual suspects like the title and description for each dataset, the number of rows and columns, the organisms and genome builds involved, whether the dataset has any pre-computed reduced dimensions, and so on. More details can be found in the Bioconductor metadata schema at https://github.com/ArtifactDB/bioconductor-metadata-index.
A DataFrame where each row corresponds to a dataset, containing various columns of metadata. Some columns may be lists to capture 1:many mappings.
Aaron Lun
searchDatasets
, to search on the metadata for specific datasets.
surveyDatasets()
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