kersplatSelectRegs: Select Kersplat regulators
In Oshlack/splatter: Simple Simulation of Single-cell RNA Sequencing Data
View source: R/kersplat-simulate.R
kersplatSelectRegs R Documentation
Select Kersplat regulators
Description
Select regulator genes in the gene network for a Kersplat simulation
Usage
kersplatSelectRegs(params, verbose)
Arguments
params
KersplatParams object containing simulation parameters.
verbose
logical. Whether to print progress messages
Details
Regulators are randomly selected, weighted according to the difference
between their out degree and in degree. This is an arbitrary weighting and
may be improved or replace in the future.
Value
KersplatParams object with gene regulators
Oshlack/splatter documentation built on Dec. 10, 2024, 3:48 p.m.
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View source: R/kersplat-simulate.R
| kersplatSelectRegs | R Documentation |
Select Kersplat regulators
Description
Select regulator genes in the gene network for a Kersplat simulation
Usage
kersplatSelectRegs(params, verbose)
Arguments
params |
KersplatParams object containing simulation parameters. |
verbose |
logical. Whether to print progress messages |
Details
Regulators are randomly selected, weighted according to the difference between their out degree and in degree. This is an arbitrary weighting and may be improved or replace in the future.
Value
KersplatParams object with gene regulators
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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