makeDiffPanel: Make difference panel

In Oshlack/splatter: Simple Simulation of Single-cell RNA Sequencing Data

Make difference panel

Description

Combine the plots from diffSCEs into a single panel.

Usage

makeDiffPanel(
  diff,
  title = "Difference comparison",
  labels = c("Means", "Variance", "Library size", "Zeros per cell", "Zeros per gene",
    "Mean-variance relationship", "Mean-zeros relationship")
)

Arguments

diff	list returned by diffSCEs.
title	title for the panel.
labels	vector of labels for each of the seven sections.

Value

Combined panel plot

Examples

sim1 <- splatSimulate(nGenes = 1000, batchCells = 20)
sim2 <- simpleSimulate(nGenes = 1000, nCells = 20)
difference <- diffSCEs(list(Splat = sim1, Simple = sim2), ref = "Simple")
panel <- makeDiffPanel(difference)

Oshlack/splatter documentation built on May 8, 2024, 5:33 a.m.