makeCompPanel: Make comparison panel
In Oshlack/splatter: Simple Simulation of Single-cell RNA Sequencing Data

makeCompPanel

R Documentation

Make comparison panel

Description

Combine the plots from compareSCEs into a single panel.

Usage

makeCompPanel(
  comp,
  title = "Comparison",
  labels = c("Means", "Variance", "Mean-variance relationship", "Library size",
    "Zeros per gene", "Zeros per cell", "Mean-zeros relationship")
)

Arguments

`comp`	list returned by `compareSCEs`.
`title`	title for the panel.
`labels`	vector of labels for each of the seven plots.

Value

Combined panel plot

Examples


sim1 <- splatSimulate(nGenes = 1000, batchCells = 20)
sim2 <- simpleSimulate(nGenes = 1000, nCells = 20)
comparison <- compareSCEs(list(Splat = sim1, Simple = sim2))
panel <- makeCompPanel(comparison)

Oshlack/splatter documentation built on Dec. 10, 2024, 3:48 p.m.