dot-CORs_coeff_heatmap: Visualize associations between different sources of...

In a3609640/eIF4F.analysis: A R package to analyze eIF4F subunits in human cancers

Visualize associations between different sources of correlation data and reveal potential pattern

Description

This function draw heatmap of combined COR list data generated from .EIF_correlation().

It should not be used directly, only inside .plot_Corr_RNAseq_TCGA_GTEX() function.

Side effects:

(1) heatmap on screen and as pdf file to show correlation strength and clustering pattern of EIF4F correlating genes.

Usage

.CORs_coeff_heatmap(df, tissue_type)

Arguments

df	combined COR data generated from .plot_Corr_RNAseq_TCGA_GTEX()
tissue_type	"All" for all tissue type, or "Lung" for specific tissue

Value

a data structure that includes clustering analysis results.

See Also

Other helper function for correlation analysis plotting: .CORs_summary_bargraph(), .CORs_vennplot(), .pathway_dotplot()

Examples

## Not run: 
.CORs_coeff_heatmap(df = DF, tissue_type = tissue_type)

## End(Not run)

a3609640/eIF4F.analysis documentation built on Jan. 2, 2023, 11:19 p.m.