dot-combine_CORs_list: Combine all the EIF4F correlating gene data from tumor and...

In a3609640/eIF4F.analysis: A R package to analyze eIF4F subunits in human cancers

Combine all the EIF4F correlating gene data from tumor and healthy tissues

Description

This function

• combines all the EIF4F correlating genes and their correlation coefficients to a data frame, with the data generated from .EIF_correlation().

• selects significant correlating genes with .is_significant_correlation()

It should not be used directly, only inside .plot_Corr_RNAseq_TCGA_GTEX() function.

Usage

.combine_CORs_list(df1, df2)

Arguments

df1	cor_value_combined of EIF.cor.tumor[[2]]
df2	cor_value_combined of EIF.cor.normal[[2]]

Value

data frame with posCORs or negCORs from both tumors and healthy tissue samples

See Also

Other helper function for correlation analysis: .combine_CORs_summary(), .get_cluster_genes(), .is_significant_correlation()

Examples

## Not run: 
.combine_COR_list(df1 = EIF.cor.tumor[[1]], df2 = EIF.cor.normal[[1]])

## End(Not run)

a3609640/eIF4F.analysis documentation built on Jan. 2, 2023, 11:19 p.m.