dot-KM_curve: Kaplan Meier survival analyses of gene expression

In a3609640/eIF4F.analysis: A R package to analyze eIF4F subunits in human cancers

Kaplan Meier survival analyses of gene expression

Description

A helper function correlates the gene expression within tumor samples with patient overall survival time from TCGA study groups

Usage

.KM_curve(gene, data, cutoff, tumor)

Arguments

gene	gene name, passed EIF argument from .plot_KM_RNAseq_TCGA()
data	df generated inside .plot_KM_RNAseq_TCGA()
cutoff	percentage of gene expression
tumor	all tumor types or specific type

Details

It should not be used directly, only inside .plot_KM_RNAseq_TCGA() function.

Side effects: (1) KM curve plots for TCGA patients with gene expression in their tumors

Value

a KM plot

See Also

Other helper function for survival analysis: .multivariable_analysis(), .univariable_analysis()

Examples

## Not run: 
.KM_curve(gene = EIF, data = df, cutoff = cutoff, tumor = tumor)

## End(Not run)

a3609640/eIF4F.analysis documentation built on Jan. 2, 2023, 11:19 p.m.