make_metabolite_species_contribution_table: Make table summarizing species contributions for each...
In borenstein-lab/mimosa2: Model-based Integration of Metabolite Observations and Species Abundances
View source: R/postProcessing.R
make_metabolite_species_contribution_table R Documentation
Make table summarizing species contributions for each analyzed metabolite
Description
Make table summarizing species contributions for each analyzed metabolite
Usage
make_metabolite_species_contribution_table(
species_data,
node_data,
tax_ref,
path_key
)
Arguments
species_data
Table from MIMOSA species contributor analysis ("_specContrib.txt")
node_data
Table of core metabolite results
tax_ref
Table of taxonomy assignments for each species
Value
Table describing species contributors for each metabolite along with its overall MIMOSA results
make_metabolite_species_contribution_table(species_data, node_data, tax_ref, path_key)
borenstein-lab/mimosa2 documentation built on Dec. 19, 2024, 12:44 a.m.
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View source: R/postProcessing.R
| make_metabolite_species_contribution_table | R Documentation |
Make table summarizing species contributions for each analyzed metabolite
Description
Make table summarizing species contributions for each analyzed metabolite
Usage
make_metabolite_species_contribution_table(
species_data,
node_data,
tax_ref,
path_key
)
Arguments
species_data |
Table from MIMOSA species contributor analysis ("_specContrib.txt") |
node_data |
Table of core metabolite results |
tax_ref |
Table of taxonomy assignments for each species |
Value
Table describing species contributors for each metabolite along with its overall MIMOSA results make_metabolite_species_contribution_table(species_data, node_data, tax_ref, path_key)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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