make_network_matrix: Convert edge list network format to matrix format, including...
In borenstein-lab/mimosa2: Model-based Integration of Metabolite Observations and Species Abundances
View source: R/shuffle_network.R
View source: R/misc_helper_functions.R
make_network_matrix R Documentation
Convert edge list network format to matrix format, including row normalization.
Description
Convert edge list network format to matrix format, including row normalization.
Convert network edge list to stoichiometric matrix
Usage
make_network_matrix(rxn_table)
make_network_matrix(rxn_table)
Arguments
rxn_table
edge list network
Value
list of two matrices, one with NAs filled in with zeros, one without, as first two outputs of generate_genomic_network
list of two matrices of compounds x genes, one with NAs to indicate lack of relationship vs. neutral and one with all zeros
Examples
make_network_matrix(randomized_edge_list)
make_network_matrix(ko_net[[3]])
borenstein-lab/mimosa2 documentation built on Dec. 19, 2024, 12:44 a.m.
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View source: R/shuffle_network.R View source: R/misc_helper_functions.R
| make_network_matrix | R Documentation |
Convert edge list network format to matrix format, including row normalization.
Description
Convert edge list network format to matrix format, including row normalization.
Convert network edge list to stoichiometric matrix
Usage
make_network_matrix(rxn_table)
make_network_matrix(rxn_table)
Arguments
rxn_table |
edge list network |
Value
list of two matrices, one with NAs filled in with zeros, one without, as first two outputs of generate_genomic_network
list of two matrices of compounds x genes, one with NAs to indicate lack of relationship vs. neutral and one with all zeros
Examples
make_network_matrix(randomized_edge_list)
make_network_matrix(ko_net[[3]])
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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