make_unnormalized_single_spec: Get functional relative abundances from a single species'...
In borenstein-lab/mimosa2: Model-based Integration of Metabolite Observations and Species Abundances
View source: R/singleSpec_contributions.R
make_unnormalized_single_spec R Documentation
Get functional relative abundances from a single species' abundances over time
Description
Get functional relative abundances from a single species' abundances over time
Usage
make_unnormalized_single_spec(contribs, otu_id = "all", out_prefix)
Arguments
contribs
metagenome_contributions output of PICRUSt
otu_id
specific OTU ID or "all"
out_prefix
file path to write to
Value
gene abundance matrix based on that species only
borenstein-lab/mimosa2 documentation built on Dec. 19, 2024, 12:44 a.m.
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View source: R/singleSpec_contributions.R
| make_unnormalized_single_spec | R Documentation |
Get functional relative abundances from a single species' abundances over time
Description
Get functional relative abundances from a single species' abundances over time
Usage
make_unnormalized_single_spec(contribs, otu_id = "all", out_prefix)
Arguments
contribs |
metagenome_contributions output of PICRUSt |
otu_id |
specific OTU ID or "all" |
out_prefix |
file path to write to |
Value
gene abundance matrix based on that species only
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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