met_table_fix: Set column name to compound and filter metabolites with too...
In borenstein-lab/mimosa2: Model-based Integration of Metabolite Observations and Species Abundances
View source: R/speciesPicrustFunctions.R
met_table_fix R Documentation
Set column name to compound and filter metabolites with too many zeros or NAs
Description
Set column name to compound and filter metabolites with too many zeros or NAs
Usage
met_table_fix(met_table, nzero_filt = 5)
Arguments
met_table
Metabolite table
nzero_filt
Number of samples that must have a nonzero/non-NA value to include that metabolite
Value
Filtered metabolite table
Examples
met_table_fix(met_table)
borenstein-lab/mimosa2 documentation built on Dec. 19, 2024, 12:44 a.m.
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View source: R/speciesPicrustFunctions.R
| met_table_fix | R Documentation |
Set column name to compound and filter metabolites with too many zeros or NAs
Description
Set column name to compound and filter metabolites with too many zeros or NAs
Usage
met_table_fix(met_table, nzero_filt = 5)
Arguments
met_table |
Metabolite table |
nzero_filt |
Number of samples that must have a nonzero/non-NA value to include that metabolite |
Value
Filtered metabolite table
Examples
met_table_fix(met_table)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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