plot_summary_contributions: Plot summary of metabolite-species contributions

In borenstein-lab/mimosa2: Model-based Integration of Metabolite Observations and Species Abundances

Plot summary of metabolite-species contributions

Description

Plot summary of metabolite-species contributions

Usage

plot_summary_contributions(
  varShares,
  include_zeros = T,
  remove_resid_rescale = F,
  met_id_col = "metID",
  include_rsq = T
)

Arguments

varShares	Dataset of contributions
include_zeros	Whether to plot taxa that do not have any contribution
remove_resid_rescale	Whether to remove the residual and rescale contributions
met_id_col	Column name with metabolite IDs

Value

plot of contributions

Examples

plot_summary_contributions(varShares)

borenstein-lab/mimosa2 documentation built on Dec. 19, 2024, 12:44 a.m.