randomize_net: Randomize a metabolic network edge list by randomly sampling...
In borenstein-lab/mimosa2: Model-based Integration of Metabolite Observations and Species Abundances
View source: R/shuffle_network.R
View source: R/core_functions.R
randomize_net R Documentation
Randomize a metabolic network edge list by randomly sampling 2 edges and if it works, switching products
Description
Randomly sample 2 edges and if it works, switch products
Usage
randomize_net(netw, n_reps)
randomize_net(netw, n_reps)
Arguments
netw
edge list network
n_reps
number of times to successfully sample and switch
Value
Network edge list in the same format with the same compounds and degree distribution, but with randomized edges
randomized edge list
Examples
randomize_net(edge_list, 3000)
randomize_net(allnet1, 1000)
borenstein-lab/mimosa2 documentation built on Dec. 19, 2024, 12:44 a.m.
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View source: R/shuffle_network.R View source: R/core_functions.R
| randomize_net | R Documentation |
Randomize a metabolic network edge list by randomly sampling 2 edges and if it works, switching products
Description
Randomly sample 2 edges and if it works, switch products
Usage
randomize_net(netw, n_reps)
randomize_net(netw, n_reps)
Arguments
netw |
edge list network |
n_reps |
number of times to successfully sample and switch |
Value
Network edge list in the same format with the same compounds and degree distribution, but with randomized edges
randomized edge list
Examples
randomize_net(edge_list, 3000)
randomize_net(allnet1, 1000)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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