transform_cmps: Apply a transformation to CMP data
In borenstein-lab/mimosa2: Model-based Integration of Metabolite Observations and Species Abundances
View source: R/core_mimosa2_funcs.R
transform_cmps R Documentation
Apply a transformation to CMP data
Description
Apply a transformation to CMP data
Usage
transform_cmps(cmp_dat, score_transform)
Arguments
cmp_dat
Dataset of species-specific metabolic potential scores
score_transform
transformation to apply (current options: zscore, log1plus, sqrt)
Value
Dataset with transformed values (rawValue is pre-transofrmation, value is now transformed value)
Examples
transform_cmps(indiv_cmps, met_transform = "zscore")
borenstein-lab/mimosa2 documentation built on Dec. 19, 2024, 12:44 a.m.
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View source: R/core_mimosa2_funcs.R
| transform_cmps | R Documentation |
Apply a transformation to CMP data
Description
Apply a transformation to CMP data
Usage
transform_cmps(cmp_dat, score_transform)
Arguments
cmp_dat |
Dataset of species-specific metabolic potential scores |
score_transform |
transformation to apply (current options: zscore, log1plus, sqrt) |
Value
Dataset with transformed values (rawValue is pre-transofrmation, value is now transformed value)
Examples
transform_cmps(indiv_cmps, met_transform = "zscore")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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