coveragePerRegion: This function calculates coverage per set of sequencing...

View source: R/utils.R

coveragePerRegionR Documentation

This function calculates coverage per set of sequencing fragments or reports disjoint position per fragment.

Description

This function calculates coverage per set of sequencing fragments or reports disjoint position per fragment.

Usage

coveragePerRegion(grl, ID = "", coverage = TRUE)

Arguments

grl

A GRangesList-class object.

ID

A unique identifier to add as a metacolumn in returned GRangesList object.

coverage

A logical value (TRUE|FALSE) if to report collapsed coverage or single reads.

Value

A GRanges-class object with resized original set of ranges.

Author(s)

David Porubsky


daewoooo/primatR documentation built on March 28, 2024, 6:41 a.m.