plotLinks: Plot significant connections between read pairs
In daewoooo/primatR: What the Package Does (TODO)
View source: R/processReadLinks.R
plotLinks R Documentation
Plot significant connections between read pairs
Description
This function takes condidate filtered links exported from function 'processReadLinks'
Usage
plotLinks(links = NULL, chromosomes = NULL, index = NULL, bsgenome = NULL)
Arguments
links
A GRanges-class object with stored links between read pairs.
chromosomes
If only a subset of the chromosomes should be binned, specify them here.
bsgenome
A reference genome to get lengths of genomic sequences (eg. GRCh38).
Author(s)
David Porubsky
daewoooo/primatR documentation built on Oct. 22, 2024, 9:41 p.m.
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View source: R/processReadLinks.R
| plotLinks | R Documentation |
Plot significant connections between read pairs
Description
This function takes condidate filtered links exported from function 'processReadLinks'
Usage
plotLinks(links = NULL, chromosomes = NULL, index = NULL, bsgenome = NULL)
Arguments
links |
A |
chromosomes |
If only a subset of the chromosomes should be binned, specify them here. |
bsgenome |
A reference genome to get lengths of genomic sequences (eg. GRCh38). |
Author(s)
David Porubsky
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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