getReciprocalOverlaps: Function to calculate percentage of reciprocal overlap...

In daewoooo/primatR: What the Package Does (TODO)

Function to calculate percentage of reciprocal overlap between two sets of ranges.

Description

Function to calculate percentage of reciprocal overlap between two sets of ranges.

Usage

getReciprocalOverlaps(query, subject, thresh = 50, report = "both", index = "")

Arguments

query	A GRanges-class object.
subject	A GRanges-class object.
thresh	A percentage threshold for a required overlap.
report	Set to 'both' if you want to return merged query and subject ranges or select only one of them.
index	An user defiend ID to disntiguish calculated overlaps.

Value

A GRanges-class object.

Author(s)

David Porubsky

daewoooo/primatR documentation built on Oct. 22, 2024, 9:41 p.m.