importReadsFromComposite: Load reads from a composite file

View source: R/import.R

importReadsFromCompositeR Documentation

Load reads from a composite file

Description

This function loads Strand-seq reads stored as a RData object either all or from a selected genomic regions.

Usage

importReadsFromComposite(compositeFile, regions = NULL, ID = "")

Arguments

compositeFile

A file containing single-cell Strand-seq reads synchronized by directionality.

regions

A GRanges-class object with genomic regions to select reads from.

ID

A unique identifier to add as a metacolumn in returned GRanges-class object.

Value

A GRanges-class object.

Author(s)

David Porubsky


daewoooo/primatR documentation built on March 28, 2024, 6:41 a.m.