plotCompositeIdeo: Plot genome-wide distribution of plus and minus reads.

plotCompositeIdeoR Documentation

Plot genome-wide distribution of plus and minus reads.

Description

Plot genome-wide distribution of plus and minus reads.

Usage

plotCompositeIdeo(
  gr = NULL,
  bin.len = 2e+05,
  chromosomes = NULL,
  colors = c("#EFEDF5", "#68228B"),
  title = NULL
)

Arguments

gr

A GRanges-class object.

bin.len

A size of bins to count directional reads in.

chromosomes

A user defined set of chromosomes to be plotted.

colors

A colors for plus and minus reads.

title

User defined title of the exported plot.

Value

A ggplot object.

Author(s)

David Porubsky


daewoooo/primatR documentation built on March 28, 2024, 6:41 a.m.