as.CellDataSet: as.CellDataSet
In ddiez/scmisc: Miscellaneus Tools for the Analysis of Single Cell Data
as.CellDataSet R Documentation
as.CellDataSet
Description
Convert several data types into monocle::CellDataSet object.
Usage
as.CellDataSet(x, expressionFamily = NULL, gene_short_name = "symbol")
## S3 method for class 'SingleCellExperiment'
as.CellDataSet(x, expressionFamily = NULL, gene_short_name = "symbol")
Arguments
x
object to convert.
expressionFamily
expression family function to use (default: negbinomial.size)
gene_short_name
column to use to set gene_short_name
Value
a CellDataSet object.
ddiez/scmisc documentation built on July 21, 2024, 11:35 a.m.
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| as.CellDataSet | R Documentation |
as.CellDataSet
Description
Convert several data types into monocle::CellDataSet object.
Usage
as.CellDataSet(x, expressionFamily = NULL, gene_short_name = "symbol")
## S3 method for class 'SingleCellExperiment'
as.CellDataSet(x, expressionFamily = NULL, gene_short_name = "symbol")
Arguments
x |
object to convert. |
expressionFamily |
expression family function to use (default: negbinomial.size) |
gene_short_name |
column to use to set gene_short_name |
Value
a CellDataSet object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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