compute_density: compute_density

In ddiez/scmisc: Miscellaneus Tools for the Analysis of Single Cell Data

compute_density

Description

compute_density

Usage

compute_density(x, ...)

## Default S3 method:
compute_density(x, y, n = 100, ...)

## S3 method for class 'SingleCellExperiment'
compute_density(x, coord.name = "TSNE", ...)

## S3 method for class 'CellDataSet'
compute_density(x, coord.name = "A", ...)

cell_density(x, ...)

Arguments

x	x coordinate of data
...	additional arguments passed down to methods.
y	y coordinate of data
n	Number of grid points in each direction. Can be scalar or a length-2 integer vector.
coord.name	name of coordinates for some methods.

Note

I took this implementation from http://slowkow.com/notes/ggplot2-color-by-density/

ddiez/scmisc documentation built on July 21, 2024, 11:35 a.m.