sample_cells: sample_cells

In ddiez/scmisc: Miscellaneus Tools for the Analysis of Single Cell Data

sample_cells

Description

Subset a single cell experiment object by sampling the number of specified cells, optionally by grouping. If neither n, frac or n_max is specified the lowest number of cells in group will be used.

Usage

sample_cells(x, ...)

## S3 method for class 'Seurat'
sample_cells(x, group = NULL, n = NULL, frac = NULL, n_max = NULL, ...)

## S3 method for class 'SingleCellExperiment'
sample_cells(x, group = NULL, n = NULL, frac = NULL, ...)

Arguments

x	an object to sample from.
...	parameters passed down to methods.
group	optional grouping variable.
n	number of cells to sample (per group).
frac	fraction of cells to sample (per group).
n_max	number of cells to sample, if less cells available then all cells returned.

ddiez/scmisc documentation built on July 21, 2024, 11:35 a.m.