filter_genes: filter_genes

In ddiez/scmisc: Miscellaneus Tools for the Analysis of Single Cell Data

filter_genes

Description

filter_genes

Usage

filter_genes(x, ...)

## S3 method for class 'SingleCellExperiment'
filter_genes(x, min.cells = 10, min.count = 0, assay.name = "counts", ...)

## S3 method for class 'matrix'
filter_genes(x, min.cells = 10, min.count = 0, ...)

Arguments

x	object to filter.
...	arguments passed down to methods.
min.cells	minimum number of cells with min.count for gene to be preserved.
min.count	minimum number of counts to be considered expressed.
assay.name	name of assay to obtain matrix of counts.

ddiez/scmisc documentation built on July 21, 2024, 11:35 a.m.